Datasets:

DNA-LLM
/

virus

Dataset card Files Files and versions

virus

21.5 GB

1 contributor

History: 31 commits

Hack90's picture

Upload sample_below_6k.parquet with huggingface_hub

e22f102 verified 1 day ago

data
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.gitattributes

3.25 kB

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IMG_VR_download.zip
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187 MB
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README.md

4.6 kB

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app.py

8.61 kB

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article.parquet

376 MB
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bpe_plus_special_tokens_model.pt
Detected Pickle imports (3)
- "torch.FloatStorage",
- "torch._utils._rebuild_tensor_v2",
- "collections.OrderedDict"
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328 MB
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Upload bpe_plus_special_tokens_model.pt with huggingface_hub 8 days ago
bpe_plus_special_tokens_tokenizer.json

843 kB
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bpe_standard_model.pt

328 MB
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bpe_standard_tokenizer.json

871 kB
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create_index.py

8.44 kB

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deduplicated_filtered_sequences_below_24k.parquet

2.66 GB
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embeddings.npy

205 MB
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encoded_sequences.npy

678 MB
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faiss.index

205 MB
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filtered_viral_sequences_below_24k.parquet

3.4 GB
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index.html

22.5 kB

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main.ipynb

198 kB

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main.py

90 Bytes

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metadata.pkl

1.07 GB
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proteins_below_4096bp.fasta

998 MB
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pyproject.toml

392 Bytes

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repeats_results_full.csv

327 MB
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requirements.txt

141 Bytes

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sample_100k_below_6kbp_full.parquet

474 MB
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sample_below_6k.parquet

570 MB
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sample_v5.parquet

506 MB
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sequences.fasta

2.67 GB
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Rename sequences(3).fasta to sequences.fasta 11 months ago
sequences.xml

86.8 MB
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sequences_1.xml

25.6 MB
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Rename sequences(2).xml to sequences_1.xml 11 months ago
sequences_20251201_6096880.fasta

315 MB
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single_nucleotide_baseline_model.pt

300 MB
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single_nucleotide_plus_scaling_mask_model.pt

300 MB
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single_nucleotide_plus_special_tokens_model.pt

301 MB
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tokenizer_components_bpe_with_repeats.pkl
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843 kB
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Upload tokenizer_components_bpe_with_repeats.pkl with huggingface_hub 8 days ago
two_d_reps_non_standardised.npy

3.4 GB
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uv.lock

239 kB

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virus_basic.model

305 kB
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virus_basic.vocab

58.1 kB

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zip_file_name.zip
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96.7 kB
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