Article
A New Era in Multistep Enzyme Design
•
9
Amelie Schreiber
AmelieSchreiber
AI & ML interests
Diffusion and flow matching models for proteins, small molecules, DNA, and RNA, protein language models, machine translation, equivariant attention mechanisms, LoRA, and QLoRA.
Organizations
published an
article over 1 year ago
published an
article over 1 year ago
Article
A Guide to Designing New Functional Proteins and Improving Protein Function, Stability, and Diversity with Generative AI
•
47
published an
article almost 2 years ago
Article
RFDiffusion Potentials
•
26
published an
article about 2 years ago
Article
Predicting the Effects of Mutations on Protein Function with ESM-2
•
28
published an
article over 2 years ago
Article
Faster Persistent Homology Alignment and Protein Complex Clustering with ESM-2 and Persistence Landscapes
•
1
published an
article over 2 years ago
Article
Clustering Protein Complexes using Persistent Homology and Finetuning ESM-2 for PPI Network Prediction
•
2
published an
article over 2 years ago
Article
ESM-2 for Generating and Optimizing Peptide Binders for Target Proteins
•
6
published an
article over 2 years ago
Article
Persistent Homology Alignment (PHA): Replacing Multiple Sequence Alignments using ESM-2 and Persistent Homology
published an
article over 2 years ago
Article
In Silico Directed Evolution of Protein Sequences with ESM-2 and EvoProtGrad
•
2
published an
article over 2 years ago
Article
QLoRA for ESM-2 and Post Translational Modification Site Prediction
•
4
published an
article over 2 years ago
Article
Estimating the Intrinsic Dimension of Protein Sequence Embeddings using ESM-2
•
3
published an
article over 2 years ago
Article
Predicting Protein-Protein Interactions Using a Protein Language Model and Linear Sum Assignment
•
12
published an
article over 2 years ago
Article
ESMBind (ESMB) Ensemble Models
•
5
published an
article over 2 years ago
Article
ESMBind (ESMB): Low Rank Adaptation of ESM-2 for Protein Binding Site Prediction
•
20